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GABA-TP1 protein (Solanum lycopersicum) - STRING interaction network
"GABA-TP1" - Gamma aminobutyrate transaminase 1, mitochondrial in Solanum lycopersicum
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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Experiments
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[Homology]
Score
GABA-TP1Gamma aminobutyrate transaminase 1, mitochondrial; Transaminase that degrades gamma-amino butyric acid (GABA) and uses pyruvate or glyoxylate as amino-group acceptor. Cannot use beta-alanine, ornithine, acetylornithine, serine, glycine, asparagine, glutamine, glutamate, valine, leucine, isoleucine, methionine, phenylalanine, histidine, lysine, arginine, aspartate, threonine, tyrosine, tryptophan, proline, or cysteine as amino donors. Acts predominantly in vegetative tissues; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (515 aa)    
Predicted Functional Partners:
SSADH
Succinic semialdehyde dehydrogenase ; Belongs to the aldehyde dehydrogenase family (522 aa)
   
  0.979
SSR1
Uncharacterized protein; Succinic semialdehyde reductase isofom1 (287 aa)
         
  0.955
SSR2
Uncharacterized protein; Succinic semialdehyde reductase isofom2 (382 aa)
         
  0.951
GAD3
Glutamate decarboxylase isoform3 ; Belongs to the group II decarboxylase family (484 aa)
   
  0.943
LOC544313
Glutamate decarboxylase; Catalyzes the production of GABA. The calmodulin-binding is calcium-dependent and it is proposed that this may, directly or indirectly, form a calcium regulated control of GABA biosynthesis (By similarity) (502 aa)
   
  0.925
GAD2
Glutamate decarboxylase isoform2 ; Belongs to the group II decarboxylase family (503 aa)
   
  0.836
SlGAD4
annotation not available (497 aa)
   
  0.733
101259235
annotation not available (493 aa)
   
  0.733
DDTFR8
Ripening regulated protein DDTFR8 (179 aa)
           
  0.730
104644281
annotation not available (321 aa)
     
   
  0.717
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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