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STRINGSTRING
Solyc07g045190.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g045190.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g045190.1.1annotation not available (121 aa)    
Predicted Functional Partners:
101247325
RING/U-box superfamily protein (276 aa)
           
  0.637
101249636
annotation not available (397 aa)
           
  0.599
101250872
Unknown protein; INVOLVED IN- biological_process unknown; LOCATED IN- cell wall; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fun /.../47; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (289 aa)
           
  0.572
101250525
Uncharacterized protein; Cytochrome P450, family 718 (493 aa)
           
  0.570
101267560
Protein kinases;ubiquitin-protein ligases (1633 aa)
     
   
  0.569
Solyc07g040790.2.1
DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 (435 aa)
           
  0.555
Solyc07g040780.2.1
annotation not available (81 aa)
           
  0.555
104649075
Uncharacterized protein; Basic-leucine zipper (bZIP) transcription factor family protein (426 aa)
           
  0.517
101248524
annotation not available (317 aa)
     
   
  0.493
101248592
Uncharacterized protein; Ubiquitin fusion degradation UFD1 family protein (569 aa)
     
   
  0.484
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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