STRINGSTRING
Solyc07g045300.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g045300.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g045300.2.1Uncharacterized protein (261 aa)    
Predicted Functional Partners:
Solyc08g068570.2.1
Uncharacterized protein (498 aa)
   
          0.503
Solyc09g015460.1.1
Uncharacterized protein (100 aa)
   
        0.485
Solyc11g008480.1.1
Uncharacterized protein (297 aa)
   
          0.472
Solyc07g066620.2.1
Uncharacterized protein (358 aa)
   
        0.460
Solyc01g097820.2.1
Uncharacterized protein (250 aa)
   
          0.457
Solyc05g013480.2.1
Uncharacterized protein (353 aa)
   
          0.455
Solyc12g013580.1.1
Uncharacterized protein (451 aa)
   
        0.445
Solyc01g008070.2.1
Uncharacterized protein (432 aa)
   
          0.426
Solyc09g008270.2.1
Uncharacterized protein (183 aa)
   
          0.421
Solyc01g109330.2.1
Uncharacterized protein (459 aa)
   
        0.417
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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