STRINGSTRING
Solyc07g047670.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g047670.2.1" - Pescadillo homolog in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g047670.2.1Pescadillo homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (603 aa)    
Predicted Functional Partners:
Solyc02g088780.2.1
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (423 aa)
     
  0.998
Solyc01g111030.1.1
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (470 aa)
     
  0.998
Solyc01g103740.2.1
Uncharacterized protein (504 aa)
     
  0.998
Solyc01g103720.2.1
Uncharacterized protein (99 aa)
     
  0.998
Solyc01g104470.2.1
Uncharacterized protein (229 aa)
     
  0.998
Solyc01g098100.2.1
60S ribosome subunit biogenesis protein NIP7 homolog ; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (187 aa)
     
 
  0.998
Solyc03g123530.2.1
Uncharacterized protein (1049 aa)
     
 
  0.998
Solyc04g074090.2.1
Uncharacterized protein (892 aa)
     
 
  0.998
Solyc10g083600.1.1
Uncharacterized protein (337 aa)
     
 
  0.998
Solyc09g090460.2.1
Uncharacterized protein (440 aa)
     
 
  0.997
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (14%) [HD]