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101257580 protein (Solanum lycopersicum) - STRING interaction network
"101257580" - Pescadillo homolog in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101257580Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (603 aa)    
Predicted Functional Partners:
101257709
Ribosomal protein S8e family protein (260 aa)
     
 
  0.997
Solyc04g074090.2.1
Uncharacterized protein; Binding (892 aa)
     
 
  0.997
101262055
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes (229 aa)
     
 
  0.996
Solyc10g083600.1.1
Ribosomal RNA processing Brix domain protein (337 aa)
     
 
  0.996
Solyc02g088780.2.1
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (423 aa)
     
 
  0.995
Solyc01g111030.1.1
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (470 aa)
     
 
  0.995
Solyc03g123530.2.1
Uncharacterized protein; CCAAT-binding factor (1049 aa)
     
 
  0.995
Solyc01g103740.2.1
annotation not available (504 aa)
     
 
  0.995
Solyc01g103720.2.1
annotation not available (99 aa)
     
 
  0.995
Solyc03g112530.2.1
WD-40 repeat family protein / notchless protein, putative (481 aa)
     
 
  0.994
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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