STRINGSTRING
Solyc07g047920.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g047920.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g047920.1.1Uncharacterized protein (555 aa)    
Predicted Functional Partners:
Solyc02g089640.2.1
Uncharacterized protein (654 aa)
       
 
  0.629
Solyc12g088240.1.1
Uncharacterized protein (688 aa)
       
 
  0.513
Solyc05g013020.1.1
Uncharacterized protein (447 aa)
       
 
  0.474
Solyc03g115740.1.1
Uncharacterized protein (450 aa)
       
 
  0.474
Solyc11g008630.1.1
Uncharacterized protein (461 aa)
           
  0.426
Solyc02g068690.2.1
Uncharacterized protein (475 aa)
       
 
  0.419
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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