STRINGSTRING
Solyc07g048080.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g048080.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g048080.2.1Uncharacterized protein (673 aa)    
Predicted Functional Partners:
Solyc03g114050.2.1
Uncharacterized protein (182 aa)
     
    0.950
Solyc07g061900.2.1
Uncharacterized protein (288 aa)
     
  0.944
Solyc05g056260.2.1
Uncharacterized protein (342 aa)
   
 
  0.942
Solyc06g051200.2.1
Uncharacterized protein (280 aa)
     
  0.941
Solyc07g063960.2.1
Uncharacterized protein (189 aa)
     
  0.939
Solyc08g078010.2.1
Uncharacterized protein (214 aa)
   
  0.936
Solyc12g014390.1.1
Uncharacterized protein (229 aa)
   
  0.935
Solyc07g062190.2.1
Uncharacterized protein (233 aa)
   
  0.935
Solyc05g009370.2.1
Uncharacterized protein (271 aa)
     
  0.935
Solyc02g081310.2.1
Uncharacterized protein (282 aa)
     
  0.935
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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