• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
100147721 protein (Solanum lycopersicum) - STRING interaction network
"100147721" - Laccase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100147721Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family (572 aa)    
Predicted Functional Partners:
101268575
Eukaryotic aspartyl protease family protein; Belongs to the peptidase A1 family (441 aa)
     
   
  0.704
Solyc08g078670.2.1
Eukaryotic aspartyl protease family protein; Belongs to the peptidase A1 family (420 aa)
     
   
  0.703
101267113
Eukaryotic aspartyl protease family protein; Belongs to the peptidase A1 family (453 aa)
     
   
  0.703
Solyc02g069360.1.1
Eukaryotic aspartyl protease family protein; Belongs to the peptidase A1 family (485 aa)
     
   
  0.703
101262431
annotation not available (158 aa)
           
  0.703
101262127
annotation not available (149 aa)
           
  0.620
Solyc02g078650.2.1
annotation not available (628 aa)
           
  0.597
Solyc04g080400.1.1
annotation not available (564 aa)
           
  0.578
ER24
Uncharacterized protein; Ethylene-responsive transcriptional coactivator; Multiprotein bridging factor ER24 (146 aa)
           
  0.578
Solyc09g008270.2.1
Unknown protein; FUNCTIONS IN- molecular_function unknown; LOCATED IN- chloroplast; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; Has 172 Blast hits to 172 proteins in 58 species- Archae - 0; Bacteria - 116; Metazoa - 0; Fun /.../; Plants - 32; Viruses - 0; Other Eukaryotes - 24 (source- NCBI BLink) (183 aa)
           
  0.576
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (17%) [HD]