STRINGSTRING
Solyc07g049460.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g049460.2.1" - Laccase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g049460.2.1Laccase (572 aa)    
Predicted Functional Partners:
Solyc11g062120.1.1
Uncharacterized protein (297 aa)
   
 
  0.659
Solyc11g062100.1.1
Uncharacterized protein (675 aa)
   
 
  0.659
Solyc08g080890.2.1
Uncharacterized protein (890 aa)
   
 
  0.659
Solyc08g080870.2.1
Uncharacterized protein (954 aa)
   
 
  0.659
Solyc08g061610.2.1
Uncharacterized protein (894 aa)
   
 
  0.659
Solyc07g009130.2.1
Uncharacterized protein (1302 aa)
   
 
  0.659
Solyc02g092920.2.1
Uncharacterized protein (821 aa)
   
 
  0.659
Solyc02g068490.2.1
Uncharacterized protein (1003 aa)
   
 
  0.659
Solyc01g105170.2.1
Uncharacterized protein (234 aa)
   
 
  0.659
Solyc01g105160.2.1
Uncharacterized protein (726 aa)
   
 
  0.659
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (17%) [HD]