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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc07g049560.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g049560.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g049560.2.1annotation not available (230 aa)    
Predicted Functional Partners:
101266417
Uncharacterized protein; Cell division cycle 48B; Belongs to the AAA ATPase family (611 aa)
           
  0.563
Solyc03g058960.1.1
annotation not available (453 aa)
       
 
  0.562
Solyc03g058950.2.1
annotation not available (642 aa)
       
 
  0.562
101258100
Protein of unknown function (DUF581) (135 aa)
       
 
  0.467
101253639
Thioredoxin superfamily protein (251 aa)
           
  0.454
101247314
Protein kinase superfamily protein; Belongs to the protein kinase superfamily (496 aa)
     
   
  0.433
101262454
Protein kinase superfamily protein; Belongs to the protein kinase superfamily (478 aa)
     
   
  0.433
Solyc03g013140.1.1
annotation not available (163 aa)
     
 
  0.427
101265052
Uncharacterized protein; EYES ABSENT homolog (296 aa)
           
  0.420
Solyc11g067060.1.1
Protein tyrosine phosphatases;protein tyrosine phosphatases (238 aa)
         
  0.417
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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