STRINGSTRING
Solyc07g049680.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g049680.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g049680.2.1Uncharacterized protein (648 aa)    
Predicted Functional Partners:
Solyc10g079730.1.1
Condensin complex subunit 1 ; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (1400 aa)
     
  0.998
Solyc11g011370.1.1
Uncharacterized protein (1038 aa)
     
  0.997
Solyc03g093260.2.1
Uncharacterized protein (552 aa)
     
  0.996
Solyc03g093250.1.1
Uncharacterized protein (647 aa)
     
  0.996
Solyc02g087980.2.1
Structural maintenance of chromosomes protein (1246 aa)
     
  0.996
Solyc02g067290.2.1
Uncharacterized protein (92 aa)
     
  0.996
Solyc06g083870.2.1
SMC1 (1218 aa)
     
  0.957
Solyc06g073780.2.1
SMC3 (1229 aa)
     
  0.956
Solyc01g087720.2.1
Uncharacterized protein (1050 aa)
     
  0.953
Solyc05g051680.2.1
Uncharacterized protein (1054 aa)
     
  0.952
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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