STRINGSTRING
Solyc07g049780.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g049780.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g049780.1.1Uncharacterized protein (338 aa)    
Predicted Functional Partners:
CNOT1
CCR4-NOT transcription complex subunit 1 (2411 aa)
     
  0.974
Solyc12g019860.1.1
Uncharacterized protein (848 aa)
     
  0.961
Solyc10g078950.1.1
Uncharacterized protein (561 aa)
       
  0.932
Solyc08g075010.2.1
Uncharacterized protein (389 aa)
       
  0.932
Solyc03g059010.2.1
Uncharacterized protein (594 aa)
       
  0.932
Solyc11g068770.1.1
Uncharacterized protein (285 aa)
     
  0.915
Solyc11g045130.1.1
Uncharacterized protein (274 aa)
     
  0.915
Solyc06g074030.1.1
Uncharacterized protein (264 aa)
     
  0.915
Solyc06g068410.2.1
Uncharacterized protein (252 aa)
     
  0.915
Solyc03g117030.1.1
Uncharacterized protein (274 aa)
     
  0.915
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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