STRINGSTRING
Solyc07g051970.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g051970.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g051970.1.1Uncharacterized protein (560 aa)    
Predicted Functional Partners:
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
     
  0.975
Solyc02g087710.2.1
Uncharacterized protein (639 aa)
     
  0.950
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
     
  0.910
Solyc02g044050.1.1
Uncharacterized protein (491 aa)
   
  0.832
Solyc09g010500.2.1
Uncharacterized protein (144 aa)
     
    0.729
Solyc06g060120.2.1
Uncharacterized protein (791 aa)
     
  0.728
Solyc04g082760.2.1
Uncharacterized protein (489 aa)
     
  0.728
Solyc03g097450.2.1
Uncharacterized protein (573 aa)
     
  0.728
Solyc01g109510.2.1
Uncharacterized protein (945 aa)
     
  0.728
Solyc09g098260.1.1
Uncharacterized protein (588 aa)
     
  0.726
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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