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STRINGSTRING
101250425 protein (Solanum lycopersicum) - STRING interaction network
"101250425" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101250425annotation not available (196 aa)    
Predicted Functional Partners:
101245441
annotation not available (693 aa)
     
  0.982
101263580
annotation not available (673 aa)
     
  0.982
CRNKL1
annotation not available (664 aa)
     
  0.982
101268140
annotation not available (916 aa)
     
  0.981
Solyc05g051070.2.1
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Isy1-like splicing (InterPro-IPR009360); H /.../7 Blast hits to 965 proteins in 236 species- Archae - 12; Bacteria - 13; Metazoa - 351; Fungi - 230; Plants - 49; Viruses - 9; Other Eukaryotes - 483 (source- NCBI BLink) (310 aa)
     
 
  0.956
cdc5
CDC5-like protein (987 aa)
     
 
  0.955
101263464
annotation not available (521 aa)
     
 
  0.952
Solyc07g007210.2.1
annotation not available (925 aa)
     
 
  0.946
101245685
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; CONTAINS InterPro DOMAIN/s- mRNA splicing factor, Cwf21 (InterPro-IPR013170); Has 30201 Blast hits to 17322 proteins in 780 sp /.../ Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (639 aa)
     
 
  0.946
Solyc03g119010.2.1
Uncharacterized protein; Modifier of snc1,4 (240 aa)
     
 
  0.945
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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