STRINGSTRING
Solyc07g052240.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g052240.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g052240.2.1Uncharacterized protein (543 aa)    
Predicted Functional Partners:
Solyc03g112590.2.1
Uncharacterized protein (831 aa)
           
  0.699
Solyc07g054170.2.1
Uncharacterized protein (267 aa)
           
  0.693
Solyc05g012210.2.1
Uncharacterized protein (463 aa)
           
  0.692
Solyc03g117630.1.1
Uncharacterized protein (654 aa)
           
  0.692
PP2C-2
Protein phosphatase 2C AHG3 homolog (406 aa)
           
  0.692
Solyc03g025810.2.1
Uncharacterized protein (659 aa)
           
  0.692
Solyc01g109920.2.1
Uncharacterized protein (249 aa)
           
  0.692
Solyc09g092690.2.1
Uncharacterized protein (581 aa)
           
  0.691
Solyc11g062120.1.1
Uncharacterized protein (297 aa)
   
 
  0.659
Solyc11g062100.1.1
Uncharacterized protein (675 aa)
   
 
  0.659
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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