STRINGSTRING
Solyc07g052290.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g052290.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g052290.1.1Uncharacterized protein (444 aa)    
Predicted Functional Partners:
Solyc12g062630.1.1
Uncharacterized protein (134 aa)
   
   
  0.585
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
   
   
  0.569
Solyc01g098990.2.1
Uncharacterized protein (308 aa)
   
        0.532
Solyc10g005880.2.1
Uridine kinase (422 aa)
   
   
  0.514
Solyc07g065890.2.1
Uridine kinase (446 aa)
   
   
  0.514
Solyc06g065580.2.1
Uridine kinase (483 aa)
   
   
  0.514
Solyc02g067880.1.1
Uridine kinase (445 aa)
   
   
  0.514
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
   
   
  0.491
Solyc11g071890.1.1
Uncharacterized protein (360 aa)
   
   
  0.484
Solyc11g062070.1.1
Uncharacterized protein (698 aa)
   
   
  0.484
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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