STRINGSTRING
TPX1 protein (Solanum lycopersicum) - STRING interaction network
"TPX1" - Peroxidase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPX1Peroxidase (328 aa)    
Predicted Functional Partners:
Eli3
ELI3 (359 aa)
         
  0.900
Solyc11g011330.1.1
Uncharacterized protein (356 aa)
         
  0.900
Solyc11g010960.1.1
Uncharacterized protein (359 aa)
         
  0.900
Solyc03g078440.2.1
Uncharacterized protein (391 aa)
         
  0.900
Solyc02g069250.2.1
Uncharacterized protein (360 aa)
         
  0.900
Solyc02g030480.2.1
Uncharacterized protein (360 aa)
         
  0.900
Solyc12g055820.1.1
Uncharacterized protein (527 aa)
         
    0.900
Solyc11g010990.1.1
Uncharacterized protein (359 aa)
         
    0.900
CTOMT1
catechol-O-methyltransferase (EC-2.1.1.6) (364 aa)
         
    0.900
Solyc08g014360.1.1
Uncharacterized protein (380 aa)
         
    0.900
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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