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STRINGSTRING
Solyc07g052770.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g052770.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g052770.2.1annotation not available (973 aa)    
Predicted Functional Partners:
101055537
Hop-interacting protein THI138 (771 aa)
     
 
  0.574
Solyc06g060810.2.1
Uncharacterized protein; Undecaprenyl pyrophosphate synthetase family protein (236 aa)
     
 
  0.557
101257856
Uncharacterized protein; Nucleotide-diphospho-sugar transferases superfamily protein (238 aa)
   
 
  0.506
Solyc06g074960.2.1
Uncharacterized protein; Phosphatidate cytidylyltransferase family protein (676 aa)
   
 
  0.503
Solyc01g110460.2.1
annotation not available (350 aa)
     
   
  0.430
101264522
Uncharacterized protein; Nucleotide-diphospho-sugar transferases superfamily protein (335 aa)
   
 
  0.430
LOC543704
GcpE (740 aa)
   
   
  0.415
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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