STRINGSTRING
Solyc07g053650.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g053650.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g053650.2.1Uncharacterized protein (822 aa)    
Predicted Functional Partners:
Solyc10g044990.1.1
Uncharacterized protein (153 aa)
     
  0.998
Solyc01g111710.2.1
Uncharacterized protein (487 aa)
     
  0.998
Solyc01g111700.1.1
Uncharacterized protein (484 aa)
     
  0.998
Solyc06g083620.2.1
Uncharacterized protein (444 aa)
     
  0.995
PSMD1
26S proteasome non-ATPase regulatory subunit 1 homolog A (1004 aa)
     
0.994
Solyc05g053650.2.1
Uncharacterized protein (993 aa)
     
0.994
MA-1
26S protease regulatory subunit 6A homolog ; The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex (By similarity) (423 aa)
     
  0.991
Solyc08g022000.1.1
Uncharacterized protein (178 aa)
     
  0.991
Solyc08g021990.1.1
Uncharacterized protein (190 aa)
     
  0.991
Solyc11g027920.1.1
Uncharacterized protein (115 aa)
     
  0.990
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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