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STRINGSTRING
101249381 protein (Solanum lycopersicum) - STRING interaction network
"101249381" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101249381annotation not available (225 aa)    
Predicted Functional Partners:
101260795
Pectinesterase; Pectin lyase-like superfamily protein (378 aa)
           
  0.797
Solyc09g059510.2.1
Integrase-type DNA-binding superfamily protein (191 aa)
           
  0.522
101247481
Proteasome component (PCI) domain protein (428 aa)
           
  0.522
LOC543920
Cystathionine gamma synthase (540 aa)
           
  0.522
Solyc02g030210.2.1
Integrase-type DNA-binding superfamily protein (351 aa)
           
  0.514
XTH16
Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues; Belongs to the glycosyl hydrolase 16 family (296 aa)
           
  0.485
NR
Nitrate reductase [NADH]; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
           
  0.463
Solyc02g077820.1.1
annotation not available (189 aa)
           
  0.459
101247955
Uncharacterized protein; SITE-1 protease (1055 aa)
           
  0.451
101258168
Transcriptional adapter; Homolog of yeast ADA2 2A (560 aa)
           
  0.426
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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