STRINGSTRING
Solyc07g054140.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g054140.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g054140.2.1Uncharacterized protein (318 aa)    
Predicted Functional Partners:
Solyc07g005200.2.1
Uncharacterized protein (199 aa)
     
  0.997
Solyc09g089630.2.1
Uncharacterized protein (145 aa)
     
  0.995
Solyc06g008520.2.1
Uncharacterized protein (117 aa)
     
  0.995
Solyc07g047720.2.1
Uncharacterized protein (245 aa)
     
  0.995
Solyc06g065740.2.1
Golgi SNAP receptor complex member 1 ; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (221 aa)
     
  0.995
Solyc01g091020.2.1
Golgi SNAP receptor complex member 1 ; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (235 aa)
     
  0.995
Solyc12g049420.1.1
Uncharacterized protein (218 aa)
     
  0.994
Solyc06g063030.2.1
Uncharacterized protein (218 aa)
     
  0.994
Solyc03g122090.2.1
Uncharacterized protein (218 aa)
     
  0.994
Solyc03g025860.2.1
Uncharacterized protein (219 aa)
     
  0.994
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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