STRINGSTRING
Solyc07g054290.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g054290.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g054290.1.1Uncharacterized protein (197 aa)    
Predicted Functional Partners:
psbB
Photosystem II CP47 chlorophyll apoprotein ; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water-plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation (553 aa)
       
 
  0.893
Solyc02g086910.2.1
Uncharacterized protein (451 aa)
   
   
  0.616
Solyc01g098640.2.1
Uncharacterized protein (289 aa)
   
   
  0.591
Solyc02g090030.2.1
Oxygen-evolving enhancer protein 1, chloroplastic (333 aa)
   
   
  0.582
PSBO
Oxygen-evolving enhancer protein 1, chloroplastic ; Stabilizes the manganese cluster which is the primary site of water splitting (329 aa)
   
   
  0.582
Solyc02g014150.2.1
Uncharacterized protein (377 aa)
   
   
  0.549
psaD
Photosystem I reaction center subunit II, chloroplastic ; PsaD can form complexes with ferredoxin and ferredoxin- oxidoreductase in photosystem I (PS I) reaction center. PSAD may encode the ferredoxin-docking protein (208 aa)
   
   
  0.541
PSBP
Oxygen-evolving enhancer protein 2, chloroplastic ; May be involved in the regulation of photosystem II (258 aa)
   
   
  0.524
Solyc06g073260.2.1
Uncharacterized protein (379 aa)
   
        0.523
LOC544217
MRNA binding protein (407 aa)
   
        0.522
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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