STRINGSTRING
Solyc07g054540.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g054540.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g054540.2.1Uncharacterized protein (380 aa)    
Predicted Functional Partners:
Solyc04g079750.2.1
Uncharacterized protein (195 aa)
 
 
  0.982
Solyc02g077460.1.1
Uncharacterized protein (216 aa)
 
 
  0.982
Solyc12g009260.1.1
3-oxoacyl-[acyl-carrier-protein] synthase (443 aa)
     
  0.890
Solyc08g082620.2.1
Uncharacterized protein (485 aa)
     
  0.890
Solyc08g016170.2.1
Uncharacterized protein (468 aa)
     
  0.890
Solyc07g049570.2.1
3-oxoacyl-[acyl-carrier-protein] synthase (465 aa)
     
  0.890
Solyc03g122120.2.1
Uncharacterized protein (558 aa)
     
  0.890
Solyc02g070790.2.1
Uncharacterized protein (469 aa)
     
  0.890
Solyc10g078740.1.1
Uncharacterized protein (392 aa)
   
 
  0.823
Solyc01g006450.2.1
Uncharacterized protein (392 aa)
   
 
  0.823
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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