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Solyc07g054820.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g054820.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g054820.2.1Uncharacterized protein (250 aa)    
Predicted Functional Partners:
psbB
Photosystem II CP47 chlorophyll apoprotein ; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water-plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation (553 aa)
       
      0.890
GPA1
Guanine nucleotide-binding protein alpha-1 subunit ; Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems (384 aa)
       
 
  0.602
Solyc01g098640.2.1
Uncharacterized protein (289 aa)
   
        0.600
Solyc03g034170.2.1
Uncharacterized protein (285 aa)
   
        0.588
Solyc04g011900.2.1
Uncharacterized protein (330 aa)
   
        0.574
Solyc10g011770.2.1
Uncharacterized protein (169 aa)
   
        0.574
Solyc01g095430.2.1
Uncharacterized protein (170 aa)
   
        0.574
Solyc01g096240.2.1
Uncharacterized protein (276 aa)
   
        0.569
Solyc05g006440.2.1
Uncharacterized protein (197 aa)
   
        0.567
Solyc02g087230.2.1
Uncharacterized protein (149 aa)
   
        0.566
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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