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101244094 protein (Solanum lycopersicum) - STRING interaction network
"101244094" - Aspartate aminotransferase 1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101244094Aspartate aminotransferase 1 (425 aa)    
Predicted Functional Partners:
ldh1
L-lactate dehydrogenase ; Belongs to the LDH/MDH superfamily (350 aa)
     
  0.980
ldh
L-lactate dehydrogenase ; Belongs to the LDH/MDH superfamily (347 aa)
     
  0.980
gdh1
Glutamate dehydrogenase (411 aa)
     
  0.979
Solyc02g086610.2.1
Isocitrate/isopropylmalate dehydrogenase family protein; Belongs to the isocitrate and isopropylmalate dehydrogenases family (471 aa)
     
  0.960
Solyc11g011930.1.1
annotation not available (420 aa)
     
  0.959
101268602
annotation not available (415 aa)
     
  0.958
101252088
annotation not available (411 aa)
     
  0.956
101246116
annotation not available (411 aa)
     
  0.956
101257803
Amino acid dehydrogenase family protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family (634 aa)
     
  0.954
LOC544088
Uncharacterized protein; Aspartate carbamoyltransferase ; Belongs to the ATCase/OTCase family (377 aa)
   
  0.950
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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