STRINGSTRING
Solyc07g055850.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g055850.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g055850.2.1Uncharacterized protein (323 aa)    
Predicted Functional Partners:
Solyc01g068640.2.1
Uncharacterized protein (604 aa)
     
  0.953
Solyc09g091570.2.1
Uncharacterized protein (505 aa)
 
  0.934
Solyc05g006810.2.1
Uncharacterized protein (708 aa)
   
  0.884
Solyc04g015490.2.1
Mg-protoporphyrin IX chelatase ; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (766 aa)
   
 
  0.820
Solyc05g012150.2.1
Uncharacterized protein (274 aa)
     
 
  0.802
Solyc01g081470.2.1
Uncharacterized protein (292 aa)
   
 
  0.751
Solyc12g013720.1.1
Uncharacterized protein (139 aa)
     
  0.739
Solyc12g013690.1.1
Uncharacterized protein (407 aa)
     
  0.739
Solyc09g055240.1.1
Uncharacterized protein (135 aa)
     
  0.739
Solyc08g078050.1.1
Uncharacterized protein (99 aa)
     
  0.739
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (6%) [HD]