STRINGSTRING
Solyc07g055980.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g055980.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g055980.2.1Uncharacterized protein (338 aa)    
Predicted Functional Partners:
Solyc10g005290.2.1
Uncharacterized protein (357 aa)
         
  0.907
Solyc04g049550.2.1
Uncharacterized protein (307 aa)
         
  0.907
Solyc04g009580.2.1
Uncharacterized protein (309 aa)
         
  0.907
Solyc04g079880.2.1
Uncharacterized protein (384 aa)
       
    0.901
Solyc01g109370.2.1
Uncharacterized protein (366 aa)
       
    0.901
Solyc01g091950.2.1
Uncharacterized protein (548 aa)
       
    0.901
Solyc12g056420.1.1
Uncharacterized protein (459 aa)
         
    0.900
Solyc09g020190.2.1
Uncharacterized protein (543 aa)
         
    0.900
Solyc08g080340.2.1
Uncharacterized protein (463 aa)
         
    0.900
Solyc08g007860.2.1
Uncharacterized protein (463 aa)
         
    0.900
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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