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GA2ox4 protein (Solanum lycopersicum) - STRING interaction network
"GA2ox4" - Gibberellin 2-oxidase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GA2ox4Gibberellin 2-oxidase ; Belongs to the iron/ascorbate-dependent oxidoreductase family (331 aa)    
Predicted Functional Partners:
GA20ox4
Gibberellin 20-oxidase 4 ; Belongs to the iron/ascorbate-dependent oxidoreductase family (364 aa)
   
   
0.744
20ox-1
Gibberellin 20-oxidase-1 ; Belongs to the iron/ascorbate-dependent oxidoreductase family (378 aa)
   
   
0.743
20ox-3
Gibberellin 20-oxidase-3 ; Belongs to the iron/ascorbate-dependent oxidoreductase family (379 aa)
   
   
0.715
3OH-2
Uncharacterized protein; 3b-hydroxylase ; Belongs to the iron/ascorbate-dependent oxidoreductase family (355 aa)
   
   
0.714
3OH-1
Gibberellin 3-beta-hydroxylase 1; 3b-hydroxylase ; Belongs to the iron/ascorbate-dependent oxidoreductase family (374 aa)
   
   
0.711
GAST1
Protein GAST1 ; Belongs to the GASA family (112 aa)
           
  0.711
20ox-2
Gibberellin 20-oxidase-2 ; Belongs to the iron/ascorbate-dependent oxidoreductase family (372 aa)
   
   
0.709
101257892
annotation not available (348 aa)
   
   
0.704
Solyc00g007180.1.1
annotation not available (349 aa)
   
   
0.700
101250306
annotation not available (349 aa)
   
   
0.700
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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