STRINGSTRING
Solyc07g061950.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g061950.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g061950.2.1Uncharacterized protein (717 aa)    
Predicted Functional Partners:
Solyc12g010840.1.1
Uncharacterized protein (591 aa)
         
    0.900
Solyc10g083760.1.1
Chloroplast threonine deaminase 1 (606 aa)
         
    0.900
Solyc10g083540.1.1
Threonine deaminase (592 aa)
         
    0.900
TD
Threonine dehydratase biosynthetic, chloroplastic (595 aa)
         
    0.900
Solyc07g053280.2.1
Alpha-keto-beta-hydroxylacyl reductoisomerase (594 aa)
         
    0.900
Solyc05g009030.2.1
3-isopropylmalate dehydrogenase ; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (406 aa)
         
    0.900
Solyc11g045390.1.1
Uncharacterized protein (59 aa)
         
  0.800
ME1
NADP-dependent malic enzyme, chloroplastic ; The chloroplastic ME isoform decarboxylates malate shuttled from neighboring mesophyll cells. The CO(2) released is then refixed by ribulose-bisphosphate carboxylase. This pathway eliminates the photorespiratory loss of CO(2) that occurs in most plants (640 aa)
         
    0.800
Solyc12g019310.1.1
Uncharacterized protein (415 aa)
         
    0.800
Solyc12g009410.1.1
Pyruvate dehydrogenase E1 component subunit alpha ; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (440 aa)
         
    0.800
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (17%) [HD]