• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc07g061950.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g061950.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g061950.2.1annotation not available (717 aa)    
Predicted Functional Partners:
101247914
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (406 aa)
         
    0.900
Solyc12g019310.1.1
annotation not available (415 aa)
         
    0.800
Solyc11g045370.1.1
annotation not available (299 aa)
         
    0.800
101252944
Uncharacterized protein; VALINE-TOLERANT 1 (490 aa)
         
    0.800
101268696
annotation not available (650 aa)
         
    0.800
101247891
annotation not available (659 aa)
         
    0.800
101267346
Uncharacterized protein; Pyruvate orthophosphate dikinase (965 aa)
         
    0.800
101257242
annotation not available (591 aa)
         
    0.650
100037737
Chloroplast threonine deaminase 1 (606 aa)
         
    0.650
101244823
annotation not available (592 aa)
         
    0.650
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (11%) [HD]