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STRINGSTRING
101245861 protein (Solanum lycopersicum) - STRING interaction network
"101245861" - Tubby-like F-box protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101245861Tubby-like F-box protein; Tubby like protein 7; Belongs to the TUB family (386 aa)    
Predicted Functional Partners:
TRRAP
annotation not available (3913 aa)
           
  0.778
EXLA1
Expansin-like protein ; Belongs to the expansin family (261 aa)
           
  0.773
101246093
annotation not available (417 aa)
           
  0.752
101267752
annotation not available (331 aa)
           
  0.739
100191111
PR1 protein ; Belongs to the CRISP family (179 aa)
           
  0.694
PR-1a1
Pathogenesis-related protein 1A1; Probably involved in the defense reaction of plants against pathogens (176 aa)
           
  0.694
101267821
annotation not available (182 aa)
           
  0.580
101260951
annotation not available (822 aa)
       
 
  0.576
Solyc02g014450.1.1
annotation not available (726 aa)
       
 
  0.576
Solyc01g097140.2.1
Uncharacterized protein; Rhodanese/Cell cycle control phosphatase superfamily protein (132 aa)
     
   
  0.574
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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