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STRINGSTRING
ppc2 protein (Solanum lycopersicum) - STRING interaction network
"ppc2" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppc2Uncharacterized protein; Phosphoenolpyruvate carboxylase 2 (964 aa)    
Predicted Functional Partners:
101267346
Uncharacterized protein; Pyruvate orthophosphate dikinase (965 aa)
         
  0.956
101260072
annotation not available (452 aa)
         
  0.927
LOC543812
Uncharacterized protein; Phosphoenolpyruvate carboxykinase (662 aa)
     
 
  0.883
101262732
Uncharacterized protein; Aldehyde dehydrogenase 11A3; Belongs to the aldehyde dehydrogenase family (496 aa)
     
 
  0.842
fdh
Formate dehydrogenase, mitochondrial; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Involved in the cell stress response; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily (381 aa)
       
  0.840
Solyc12g088160.1.1
annotation not available (651 aa)
     
 
  0.838
mdh
Malate dehydrogenase (442 aa)
     
 
  0.805
chMDH
Uncharacterized protein; Chloroplast malate dehydrogenase (467 aa)
     
 
  0.804
Solyc02g092530.2.1
annotation not available (420 aa)
         
    0.800
101250047
Pale cress protein (PAC) (308 aa)
           
  0.775
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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