STRINGSTRING
Solyc07g062540.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g062540.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g062540.2.1Uncharacterized protein (569 aa)    
Predicted Functional Partners:
Solyc09g074900.2.1
Uncharacterized protein (433 aa)
       
  0.994
Solyc01g089900.2.1
Uncharacterized protein (499 aa)
     
  0.994
Solyc02g085860.2.1
Uncharacterized protein (348 aa)
     
  0.948
Solyc05g054460.2.1
Uncharacterized protein (335 aa)
       
 
  0.930
Solyc04g082670.2.1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 ; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (612 aa)
     
 
  0.804
Solyc05g056130.2.1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 ; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (486 aa)
     
 
  0.799
Solyc07g014700.2.1
Uncharacterized protein (650 aa)
     
 
  0.789
Solyc05g046330.2.1
Uncharacterized protein (746 aa)
     
 
  0.789
Solyc01g109410.2.1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit ; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (434 aa)
     
 
  0.784
Solyc04g082390.2.1
Uncharacterized protein (238 aa)
       
 
  0.716
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (14%) [HD]