STRINGSTRING
Solyc07g063100.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g063100.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g063100.2.1Uncharacterized protein (628 aa)    
Predicted Functional Partners:
Solyc09g031780.2.1
Uncharacterized protein (1005 aa)
       
      0.604
Solyc05g052160.2.1
Translocase of chloroplast ; GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis (301 aa)
       
      0.569
LHA4
Plasma membrane H+-ATPase (965 aa)
       
      0.483
Solyc06g051270.2.1
Uncharacterized protein (361 aa)
           
  0.483
GMP
GDP-mannose pyrophosphorylase (361 aa)
           
  0.483
Solyc02g088700.2.1
Uncharacterized protein (532 aa)
           
  0.483
Solyc12g008630.1.1
Uncharacterized protein (504 aa)
           
  0.482
Solyc12g096470.1.1
Uncharacterized protein (138 aa)
           
  0.418
Solyc04g015170.2.1
Uncharacterized protein (423 aa)
           
  0.418
Solyc05g053260.2.1
Uncharacterized protein (561 aa)
           
  0.406
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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