STRINGSTRING
Solyc07g063450.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g063450.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g063450.1.1Uncharacterized protein (915 aa)    
Predicted Functional Partners:
Solyc04g072410.2.1
Uncharacterized protein (175 aa)
       
  0.973
Solyc01g100840.2.1
Uncharacterized protein (141 aa)
     
  0.971
Solyc04g015050.2.1
Uncharacterized protein (194 aa)
       
  0.970
Solyc06g068030.2.1
Uncharacterized protein (137 aa)
       
  0.969
Solyc10g006490.2.1
Uncharacterized protein (186 aa)
     
  0.969
Solyc01g096530.2.1
Uncharacterized protein (186 aa)
     
  0.969
Solyc03g007680.2.1
Uncharacterized protein (175 aa)
       
  0.969
Solyc01g006960.2.1
Uncharacterized protein (1268 aa)
     
 
  0.955
Solyc02g089970.2.1
Uncharacterized protein (1509 aa)
     
  0.820
Solyc06g065840.2.1
Uncharacterized protein (1185 aa)
     
  0.811
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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