STRINGSTRING
Solyc07g063510.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g063510.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g063510.2.1Uncharacterized protein (449 aa)    
Predicted Functional Partners:
Solyc07g032590.1.1
Uncharacterized protein (218 aa)
 
          0.463
Solyc08g065220.2.1
Putative glycine decarboxylase p-protein (1036 aa)
              0.461
Solyc07g032580.1.1
Uncharacterized protein (126 aa)
 
          0.457
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
           
  0.456
Solyc07g015980.2.1
Uncharacterized protein (524 aa)
 
          0.455
Solyc10g044840.1.1
Uncharacterized protein (298 aa)
   
     
  0.451
Solyc07g016050.2.1
Uncharacterized protein (345 aa)
 
          0.427
Solyc12g013870.1.1
Uncharacterized protein (327 aa)
   
          0.427
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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