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Solyc07g064160.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g064160.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g064160.2.1Uncharacterized protein (354 aa)    
Predicted Functional Partners:
Solyc01g103950.2.1
Uncharacterized protein (553 aa)
   
   
  0.715
Solyc06g006080.2.1
Thiamine biosynthesis protein ThiC variant L1; Thiamine biosynthesis protein ThiC variant L2; Thiamine biosynthesis protein ThiC variant S (651 aa)
   
   
  0.692
Solyc11g065740.1.1
Uncharacterized protein (213 aa)
     
      0.612
Solyc07g066320.2.1
Uncharacterized protein (419 aa)
         
  0.546
Solyc11g068830.1.1
Uncharacterized protein (477 aa)
         
  0.455
Solyc09g074970.2.1
Uncharacterized protein (258 aa)
           
  0.446
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
           
  0.438
Solyc05g053480.2.1
Uncharacterized protein (289 aa)
     
   
  0.424
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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