STRINGSTRING
Solyc07g064250.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g064250.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g064250.2.1Uncharacterized protein (481 aa)    
Predicted Functional Partners:
Solyc02g080380.2.1
Derlin ; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (245 aa)
     
      0.586
Solyc07g056390.2.1
Uncharacterized protein (473 aa)
       
 
  0.488
Solyc02g069590.2.1
Uncharacterized protein (281 aa)
     
 
  0.468
Solyc02g030250.2.1
Uncharacterized protein (291 aa)
     
 
  0.468
Solyc03g031620.2.1
Uncharacterized protein (456 aa)
     
 
  0.412
LOC544267
Adenylyl-sulfate reductase (461 aa)
     
 
  0.412
Solyc02g032860.2.1
Uncharacterized protein (456 aa)
     
 
  0.412
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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