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101252507 protein (Solanum lycopersicum) - STRING interaction network
"101252507" - KRR1 family protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
101252507KRR1 family protein (618 aa)    
Predicted Functional Partners:
101259018
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (382 aa)
     
 
  0.997
Solyc01g090470.2.1
rRNA processing protein-related (389 aa)
     
      0.983
101253879
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA (552 aa)
     
 
  0.982
101261410
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Nop14-like protein (InterPr /.../07276); Has 69842 Blast hits to 35213 proteins in 1572 species- Archae - 363; Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants - 2912; Viruses - 517; Other Eukaryotes - 16596 (source- NCBI BLink) (940 aa)
     
 
  0.979
Solyc09g083080.2.1
annotation not available (552 aa)
     
 
  0.978
101255995
annotation not available (513 aa)
     
 
  0.978
101265585
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein; Belongs to the DEAD box helicase family (799 aa)
     
 
  0.977
Solyc03g051900.2.1
Uncharacterized protein; RNA binding;RNA binding (1979 aa)
     
 
  0.973
Solyc10g084740.1.1
annotation not available (440 aa)
     
 
  0.972
Solyc08g008040.2.1
annotation not available (203 aa)
     
 
  0.972
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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