STRINGSTRING
Solyc07g064350.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g064350.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g064350.1.1Uncharacterized protein (618 aa)    
Predicted Functional Partners:
Solyc02g069950.2.1
KRR-R motif-containing protein 1 ; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (382 aa)
     
 
  0.998
Solyc01g090470.2.1
Uncharacterized protein (389 aa)
     
      0.997
Solyc05g011990.2.1
Uncharacterized protein (940 aa)
     
 
  0.994
Solyc03g112820.2.1
U3 small nucleolar ribonucleoprotein protein MPP10 ; Involved in nucleolar processing of pre-18S ribosomal RNA (552 aa)
     
 
  0.984
Solyc07g042380.2.1
Uncharacterized protein (1248 aa)
     
      0.982
Solyc04g015940.2.1
Uncharacterized protein (1162 aa)
     
      0.982
Solyc12g088290.1.1
Uncharacterized protein (820 aa)
     
      0.981
Solyc04g077740.1.1
Uncharacterized protein (360 aa)
     
      0.981
Solyc04g077680.2.1
Uncharacterized protein (809 aa)
     
      0.981
Solyc12g038460.1.1
Uncharacterized protein (86 aa)
     
 
  0.975
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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