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STRINGSTRING
101244206 protein (Solanum lycopersicum) - STRING interaction network
"101244206" - Unknown protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101244206Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 25 plant structures; EXPRESSED DURING- 15 growth stages; BEST Arabidopsis thaliana protein matc /.../unknown protein (TAIR-AT5G58510.1); Has 223 Blast hits to 218 proteins in 80 species- Archae - 0; Bacteria - 2; Metazoa - 117; Fungi - 6; Plants - 65; Viruses - 0; Other Eukaryotes - 33 (source- NCBI BLink) (673 aa)    
Predicted Functional Partners:
101244685
Unknown protein; Has 158 Blast hits to 158 proteins in 77 species- Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 21 (source- NCBI BLink) (455 aa)
     
 
  0.794
101249217
Transducin family protein / WD-40 repeat family protein (2515 aa)
     
 
  0.562
101260000
annotation not available (161 aa)
           
  0.560
101264931
AP complex subunit sigma; SNARE-like superfamily protein; Belongs to the adaptor complexes small subunit family (143 aa)
           
  0.560
Solyc10g086070.1.1
annotation not available (544 aa)
     
        0.547
Solyc09g007670.2.1
annotation not available (550 aa)
     
        0.547
101256240
Rab escort protein (552 aa)
     
   
  0.513
Solyc11g008020.1.1
annotation not available (216 aa)
     
 
  0.462
Solyc10g086310.1.1
annotation not available (209 aa)
     
 
  0.462
101255914
annotation not available (216 aa)
     
 
  0.462
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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