STRINGSTRING
Solyc07g064950.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g064950.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g064950.2.1Uncharacterized protein (527 aa)    
Predicted Functional Partners:
Solyc00g030210.1.1
Annotation not available (1147 aa)
   
 
  0.962
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
   
 
  0.958
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
   
 
  0.949
Solyc11g040390.1.1
Uncharacterized protein (819 aa)
     
 
  0.936
Solyc06g064550.2.1
Uncharacterized protein (919 aa)
     
 
  0.936
Solyc12g005330.1.1
Uncharacterized protein (260 aa)
   
 
  0.927
Solyc10g047090.1.1
Uncharacterized protein (99 aa)
   
 
  0.927
Solyc10g018610.1.1
Uncharacterized protein (166 aa)
   
 
  0.927
RPL8
60S ribosomal protein L8 (260 aa)
   
 
  0.927
Solyc08g075410.2.1
Ribosomal protein L2 (202 aa)
   
 
  0.927
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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