STRINGSTRING
Solyc07g065310.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g065310.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g065310.2.1Uncharacterized protein (662 aa)    
Predicted Functional Partners:
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
   
   
  0.983
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
   
   
  0.865
Solyc01g090200.2.1
Uncharacterized protein (1061 aa)
              0.521
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
   
   
  0.489
Solyc09g008130.2.1
Phosphoglycerate kinase (683 aa)
         
  0.476
Solyc08g066180.2.1
Uncharacterized protein (587 aa)
         
  0.451
Solyc12g099800.1.1
Uncharacterized protein (303 aa)
         
  0.441
Solyc00g026870.1.1
Annotation not available (465 aa)
     
      0.425
Solyc02g079100.2.1
Uncharacterized protein (385 aa)
         
  0.419
Solyc11g071320.1.1
Uncharacterized protein (146 aa)
     
      0.407
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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