STRINGSTRING
Solyc07g065400.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g065400.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g065400.2.1Uncharacterized protein (201 aa)    
Predicted Functional Partners:
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
     
  0.969
Solyc11g012150.1.1
Uncharacterized protein (500 aa)
     
  0.931
Solyc06g082800.2.1
Uncharacterized protein (312 aa)
     
  0.883
Solyc06g007710.2.1
Uncharacterized protein (314 aa)
     
  0.883
Solyc11g039910.1.1
Uncharacterized protein (233 aa)
     
  0.869
Solyc07g065200.2.1
Uncharacterized protein (209 aa)
     
  0.869
Solyc06g082270.1.1
Uncharacterized protein (236 aa)
     
  0.869
Solyc12g049220.1.1
Uncharacterized protein (185 aa)
     
  0.858
Solyc10g024350.1.1
Uncharacterized protein (151 aa)
     
  0.858
Solyc03g121860.1.1
Uncharacterized protein (190 aa)
     
  0.858
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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