• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc07g065400.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g065400.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g065400.2.1annotation not available (201 aa)    
Predicted Functional Partners:
101258291
Uncharacterized protein; Translocase of the inner mitochondrial membrane 13; Belongs to the small Tim family (88 aa)
     
 
  0.980
101262530
annotation not available (312 aa)
     
 
  0.966
101254390
annotation not available (314 aa)
     
 
  0.966
101251332
annotation not available (498 aa)
     
 
  0.907
101263280
Sulfhydryl oxidase; Erv1/Alr family protein (200 aa)
     
   
  0.888
Solyc06g083880.2.1
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; EXPRESSED IN- 16 plant structures; EXPRESSED DURING- 7 growth stages; Has 71 Blast hits to 71 proteins in 14 species /.../ae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (152 aa)
     
 
  0.874
101248805
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- cultured cell; CONTAINS InterPro DOMAIN/s- Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro-IPR013261) /.../35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (311 aa)
     
 
  0.871
101248377
Cox19-like CHCH family protein (153 aa)
     
 
  0.865
101246808
Uncharacterized protein; Translocase inner membrane subunit 8; Belongs to the small Tim family (76 aa)
     
 
  0.863
101255048
annotation not available (93 aa)
     
   
  0.861
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (13%) [HD]