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101245077 protein (Solanum lycopersicum) - STRING interaction network
"101245077" - Vesicle transport protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101245077Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex (233 aa)    
Predicted Functional Partners:
101263096
Ubiquitin-fold modifier 1; Ubiquitin-like modifier (99 aa)
           
  0.852
101246652
Ubiquitin-fold modifier 1; Ubiquitin-like modifier (98 aa)
           
  0.852
Rab1B
Small GTP-binding protein (202 aa)
     
      0.711
101250531
Uncharacterized protein; Syntaxin of plants 32; Belongs to the syntaxin family (341 aa)
     
 
  0.584
Solyc07g054140.2.1
Uncharacterized protein; Syntaxin of plants 31; Belongs to the syntaxin family (318 aa)
     
 
  0.571
Solyc10g076350.1.1
annotation not available (136 aa)
     
   
  0.560
101253800
Tautomerase/MIF superfamily protein (115 aa)
     
   
  0.560
101259553
annotation not available (199 aa)
     
 
  0.551
100736470
Autophagy-related protein; Autophagy 8h ; Belongs to the ATG8 family (119 aa)
     
 
  0.519
101244295
annotation not available (401 aa)
           
  0.517
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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