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STRINGSTRING
Solyc07g065890.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g065890.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g065890.2.1annotation not available (446 aa)    
Predicted Functional Partners:
101244927
Uncharacterized protein; Uridine 5’-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) (477 aa)
   
  0.978
101255711
annotation not available (326 aa)
   
 
  0.952
101256028
annotation not available (286 aa)
   
   
0.926
Solyc03g078080.2.1
Amino acid kinase family protein (326 aa)
   
 
  0.922
LOC544088
Uncharacterized protein; Aspartate carbamoyltransferase ; Belongs to the ATCase/OTCase family (377 aa)
     
   
  0.817
101258052
Uncharacterized protein; Carbamoyl phosphate synthetase A (426 aa)
     
   
  0.817
101261880
Uncharacterized protein; Pyrimidine 2 (534 aa)
     
 
  0.800
101259342
Uncharacterized protein; AZA-guanine resistant1 (577 aa)
     
   
  0.799
Solyc11g051200.1.1
annotation not available (182 aa)
           
  0.798
Solyc00g009760.2.1
annotation not available (148 aa)
           
  0.798
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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