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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101243907 protein (Solanum lycopersicum) - STRING interaction network
"101243907" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101243907annotation not available (357 aa)    
Predicted Functional Partners:
SBPase
Chloroplast sedoheptulose-1,7-bisphosphatase (394 aa)
     
 
  0.959
101254111
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family (401 aa)
   
  0.953
101264854
annotation not available (683 aa)
   
  0.952
101253805
annotation not available (482 aa)
   
  0.952
Solyc04g011510.2.1
Uncharacterized protein; Triosephosphate isomerase (259 aa)
     
 
  0.951
101266713
annotation not available (399 aa)
   
  0.950
101253541
annotation not available (409 aa)
   
  0.950
101249445
annotation not available (450 aa)
   
  0.944
101256813
annotation not available (419 aa)
   
  0.944
101255800
annotation not available (337 aa)
   
  0.944
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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