STRINGSTRING
LOC606305 protein (Solanum lycopersicum) - STRING interaction network
"LOC606305" - Putative uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC606305Putative uncharacterized protein (750 aa)    
Predicted Functional Partners:
LOC778199
Putative uncharacterized protein (739 aa)
           
  0.929
LOC778198
Putative uncharacterized protein (607 aa)
     
   
  0.702
Ls
Lateral suppressor; Lateral suppressor protein (428 aa)
           
  0.693
Solyc02g076720.2.1
Uncharacterized protein (1459 aa)
   
   
  0.558
Solyc01g107270.2.1
Uncharacterized protein (1333 aa)
   
   
  0.543
Solyc09g075800.2.1
Chloride channel protein (793 aa)
     
   
  0.495
Solyc10g044470.1.1
Uncharacterized protein (764 aa)
     
   
  0.478
Solyc07g007690.2.1
Uncharacterized protein (788 aa)
     
   
  0.478
Solyc02g094060.2.1
Chloride channel protein (763 aa)
     
   
  0.478
Solyc02g068080.2.1
Chloride channel protein (784 aa)
     
   
  0.478
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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