STRINGSTRING
Solyc07g066280.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g066280.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g066280.2.1Uncharacterized protein (367 aa)    
Predicted Functional Partners:
Solyc09g074650.2.1
Uncharacterized protein (420 aa)
   
 
  0.960
Solyc11g020590.1.1
Uncharacterized protein (256 aa)
   
 
  0.957
Solyc03g078020.2.1
Uncharacterized protein (283 aa)
   
 
  0.957
Solyc04g074150.1.1
Uncharacterized protein (115 aa)
       
  0.896
Solyc04g056540.2.1
Uncharacterized protein (603 aa)
         
  0.556
Solyc00g042130.1.1
Annotation not available (704 aa)
   
        0.549
Solyc00g042140.1.1
Annotation not available (399 aa)
   
        0.524
Solyc05g055610.2.1
Uncharacterized protein (994 aa)
       
 
  0.481
Solyc11g040390.1.1
Uncharacterized protein (819 aa)
         
  0.468
Solyc06g064550.2.1
Uncharacterized protein (919 aa)
         
  0.468
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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