• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101258281 protein (Solanum lycopersicum) - STRING interaction network
"101258281" - Lojap-related protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101258281Lojap-related protein (233 aa)    
Predicted Functional Partners:
101262888
Ribosomal protein L9 (192 aa)
   
      0.922
Solyc00g026870.1.1
annotation not available (465 aa)
   
 
  0.889
Solyc01g105460.2.1
UbiA prenyltransferase family protein (391 aa)
   
        0.880
101249944
Uncharacterized protein; Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein (295 aa)
     
        0.880
101245198
Uncharacterized protein; Translation elongation factor EF1B/ribosomal protein S6 family protein (305 aa)
   
        0.877
Solyc01g097860.2.1
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unknown functi /.../1517 (InterPro-IPR010903); Has 276 Blast hits to 275 proteins in 83 species- Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source- NCBI BLink) (288 aa)
     
        0.865
Solyc10g080040.1.1
Uncharacterized protein; LOCATED IN- mitochondrion; BEST Arabidopsis thaliana protein match is- Ribonuclease III family protein (TAIR-AT4G37510.1) (593 aa)
     
        0.864
101255645
annotation not available (291 aa)
     
      0.862
101245790
annotation not available (290 aa)
     
      0.862
101251020
LYR family of Fe/S cluster biogenesis protein (132 aa)
     
        0.862
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (7%) [HD]