STRINGSTRING
MYC1 protein (Solanum lycopersicum) - STRING interaction network
"MYC1" - Transcription factor MYC1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYC1Transcription factor MYC1 (464 aa)    
Predicted Functional Partners:
Solyc12g011200.1.1
Uncharacterized protein (335 aa)
           
  0.693
Solyc07g055280.2.1
Uncharacterized protein (275 aa)
           
  0.693
Solyc02g062400.2.1
Expression of terpenoids 1 (351 aa)
           
  0.692
GGPS1
Geranylgeranyl pyrophosphate synthase 1 (365 aa)
           
  0.674
WRKY72
WRKY72 (524 aa)
           
  0.519
Cel3
Endo-1,4-beta-glucanase (617 aa)
           
  0.461
SYMRK
Symbiosis receptor-like kinase (903 aa)
           
  0.461
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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