STRINGSTRING
Solyc08g005140.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g005140.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g005140.2.1Uncharacterized protein (226 aa)    
Predicted Functional Partners:
Solyc02g068750.1.1
Uncharacterized protein (346 aa)
   
  0.984
Solyc01g108260.2.1
Uncharacterized protein (153 aa)
       
  0.982
Solyc05g050940.2.1
Uncharacterized protein (453 aa)
   
  0.965
Solyc10g007420.2.1
Uncharacterized protein (425 aa)
     
 
  0.808
Solyc10g007240.1.1
Uncharacterized protein (594 aa)
     
 
  0.808
Solyc10g007230.1.1
Uncharacterized protein (596 aa)
     
 
  0.808
GRX1
SlGRX1 protein (292 aa)
     
 
  0.742
Solyc06g067960.2.1
Uncharacterized protein (170 aa)
     
 
  0.742
Solyc02g082200.2.1
Uncharacterized protein (176 aa)
     
 
  0.742
Solyc02g078360.2.1
Uncharacterized protein (296 aa)
     
 
  0.742
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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