STRINGSTRING
Solyc08g005200.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g005200.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g005200.2.1Uncharacterized protein (273 aa)    
Predicted Functional Partners:
Solyc03g115760.2.1
Uncharacterized protein (221 aa)
     
  0.992
Solyc10g081060.1.1
Uncharacterized protein (223 aa)
     
  0.991
Solyc07g065030.2.1
Uncharacterized protein (209 aa)
     
  0.991
Solyc07g005200.2.1
Uncharacterized protein (199 aa)
     
  0.991
Solyc05g013050.2.1
Uncharacterized protein (221 aa)
     
  0.964
Solyc12g089150.1.1
Uncharacterized protein (129 aa)
     
  0.961
Solyc12g014550.1.1
Uncharacterized protein (153 aa)
     
  0.961
Solyc06g050770.2.1
Uncharacterized protein (289 aa)
     
  0.958
Solyc05g052310.2.1
Uncharacterized protein (243 aa)
     
  0.958
Solyc04g064820.2.1
Uncharacterized protein (568 aa)
     
  0.950
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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