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STRINGSTRING
101265660 protein (Solanum lycopersicum) - STRING interaction network
"101265660" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101265660annotation not available (361 aa)    
Predicted Functional Partners:
ARF3
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (747 aa)
       
 
  0.628
101263362
S-acyltransferase; DHHC-type zinc finger family protein; Belongs to the DHHC palmitoyltransferase family (284 aa)
           
  0.628
101258781
B-box type zinc finger protein with CCT domain (373 aa)
           
  0.628
Solyc04g076530.2.1
annotation not available (632 aa)
           
  0.628
101248286
annotation not available (180 aa)
           
  0.628
101256637
DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases (1086 aa)
           
  0.627
101258923
annotation not available (191 aa)
           
  0.608
101247536
Uncharacterized protein; Plant-specific transcription factor YABBY family protein (180 aa)
           
  0.608
ARF4
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (811 aa)
       
 
  0.581
101258218
annotation not available (230 aa)
           
  0.567
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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